You are viewing documentation about an older version (1.7.0). View latest version

snowflake.ml.modeling.covariance.GraphicalLasso

class snowflake.ml.modeling.covariance.GraphicalLasso(*, alpha=0.01, mode='cd', covariance=None, tol=0.0001, enet_tol=0.0001, max_iter=100, verbose=False, eps=2.220446049250313e-16, assume_centered=False, input_cols: Optional[Union[str, Iterable[str]]] = None, output_cols: Optional[Union[str, Iterable[str]]] = None, label_cols: Optional[Union[str, Iterable[str]]] = None, passthrough_cols: Optional[Union[str, Iterable[str]]] = None, drop_input_cols: Optional[bool] = False, sample_weight_col: Optional[str] = None)

Bases: BaseTransformer

Sparse inverse covariance estimation with an l1-penalized estimator For more details on this class, see sklearn.covariance.GraphicalLasso

Parameters:

  • input_cols (Optional[Union[str, List[str]]]) – A string or list of strings representing column names that contain features. If this parameter is not specified, all columns in the input DataFrame except the columns specified by label_cols, sample_weight_col, and passthrough_cols parameters are considered input columns. Input columns can also be set after initialization with the set_input_cols method.

  • label_cols (Optional[Union[str, List[str]]]) – A string or list of strings representing column names that contain labels. Label columns must be specified with this parameter during initialization or with the set_label_cols method before fitting.

  • output_cols (Optional[Union[str, List[str]]]) – A string or list of strings representing column names that will store the output of predict and transform operations. The length of output_cols must match the expected number of output columns from the specific predictor or transformer class used. If you omit this parameter, output column names are derived by adding an OUTPUT_ prefix to the label column names for supervised estimators, or OUTPUT_<IDX>for unsupervised estimators. These inferred output column names work for predictors, but output_cols must be set explicitly for transformers. In general, explicitly specifying output column names is clearer, especially if you don’t specify the input column names. To transform in place, pass the same names for input_cols and output_cols. be set explicitly for transformers. Output columns can also be set after initialization with the set_output_cols method.

  • sample_weight_col (Optional[str]) – A string representing the column name containing the sample weights. This argument is only required when working with weighted datasets. Sample weight column can also be set after initialization with the set_sample_weight_col method.

  • passthrough_cols (Optional[Union[str, List[str]]]) – A string or a list of strings indicating column names to be excluded from any operations (such as train, transform, or inference). These specified column(s) will remain untouched throughout the process. This option is helpful in scenarios requiring automatic input_cols inference, but need to avoid using specific columns, like index columns, during training or inference. Passthrough columns can also be set after initialization with the set_passthrough_cols method.

  • drop_input_cols (Optional[bool], default=False) – If set, the response of predict(), transform() methods will not contain input columns.

  • alpha (float, default=0.01) – The regularization parameter: the higher alpha, the more regularization, the sparser the inverse covariance. Range is (0, inf].

  • mode ({'cd', 'lars'}, default='cd') – The Lasso solver to use: coordinate descent or LARS. Use LARS for very sparse underlying graphs, where p > n. Elsewhere prefer cd which is more numerically stable.

  • covariance ("precomputed", default=None) – If covariance is “precomputed”, the input data in fit is assumed to be the covariance matrix. If None, the empirical covariance is estimated from the data X.

  • tol (float, default=1e-4) – The tolerance to declare convergence: if the dual gap goes below this value, iterations are stopped. Range is (0, inf].

  • enet_tol (float, default=1e-4) – The tolerance for the elastic net solver used to calculate the descent direction. This parameter controls the accuracy of the search direction for a given column update, not of the overall parameter estimate. Only used for mode=’cd’. Range is (0, inf].

  • max_iter (int, default=100) – The maximum number of iterations.

  • verbose (bool, default=False) – If verbose is True, the objective function and dual gap are plotted at each iteration.

  • eps (float, default=eps) – The machine-precision regularization in the computation of the Cholesky diagonal factors. Increase this for very ill-conditioned systems. Default is np.finfo(np.float64).eps.

  • assume_centered (bool, default=False) – If True, data are not centered before computation. Useful when working with data whose mean is almost, but not exactly zero. If False, data are centered before computation.

Base class for all transformers.

Methods

fit(dataset: Union[DataFrame, DataFrame]) → BaseEstimator

Runs universal logics for all fit implementations.

fit_transform(dataset: Union[DataFrame, DataFrame], output_cols_prefix: str = 'fit_transform_') → Union[DataFrame, DataFrame]

Method not supported for this class.

Raises:

TypeError – Supported dataset types: snowpark.DataFrame, pandas.DataFrame.

Parameters:

dataset – Union[snowflake.snowpark.DataFrame, pandas.DataFrame] Snowpark or Pandas DataFrame.

output_cols_prefix: Prefix for the response columns :returns: Transformed dataset.

get_input_cols() → List[str]

Input columns getter.

Returns:

Input columns.

get_label_cols() → List[str]

Label column getter.

Returns:

Label column(s).

get_output_cols() → List[str]

Output columns getter.

Returns:

Output columns.

get_params(deep: bool = True) → Dict[str, Any]

Get the snowflake-ml parameters for this transformer.

Parameters:

deep – If True, will return the parameters for this transformer and contained subobjects that are transformers.

Returns:

Parameter names mapped to their values.

get_passthrough_cols() → List[str]

Passthrough columns getter.

Returns:

Passthrough column(s).

get_sample_weight_col() → Optional[str]

Sample weight column getter.

Returns:

Sample weight column.

get_sklearn_args(default_sklearn_obj: Optional[object] = None, sklearn_initial_keywords: Optional[Union[str, Iterable[str]]] = None, sklearn_unused_keywords: Optional[Union[str, Iterable[str]]] = None, snowml_only_keywords: Optional[Union[str, Iterable[str]]] = None, sklearn_added_keyword_to_version_dict: Optional[Dict[str, str]] = None, sklearn_added_kwarg_value_to_version_dict: Optional[Dict[str, Dict[str, str]]] = None, sklearn_deprecated_keyword_to_version_dict: Optional[Dict[str, str]] = None, sklearn_removed_keyword_to_version_dict: Optional[Dict[str, str]] = None) → Dict[str, Any]

Get sklearn keyword arguments.

This method enables modifying object parameters for special cases.

Parameters:

  • default_sklearn_obj – Sklearn object used to get default parameter values. Necessary when sklearn_added_keyword_to_version_dict is provided.

  • sklearn_initial_keywords – Initial keywords in sklearn.

  • sklearn_unused_keywords – Sklearn keywords that are unused in snowml.

  • snowml_only_keywords – snowml only keywords not present in sklearn.

  • sklearn_added_keyword_to_version_dict – Added keywords mapped to the sklearn versions in which they were added.

  • sklearn_added_kwarg_value_to_version_dict – Added keyword argument values mapped to the sklearn versions in which they were added.

  • sklearn_deprecated_keyword_to_version_dict – Deprecated keywords mapped to the sklearn versions in which they were deprecated.

  • sklearn_removed_keyword_to_version_dict – Removed keywords mapped to the sklearn versions in which they were removed.

Returns:

Sklearn parameter names mapped to their values.

score(dataset: Union[DataFrame, DataFrame]) → float

Compute the log-likelihood of X_test under the estimated Gaussian model For more details on this function, see sklearn.covariance.GraphicalLasso.score

Raises:

TypeError – Supported dataset types: snowpark.DataFrame, pandas.DataFrame.

Parameters:

dataset – Union[snowflake.snowpark.DataFrame, pandas.DataFrame] Snowpark or Pandas DataFrame.

Returns:

Score.

score_samples(dataset: Union[DataFrame, DataFrame], output_cols_prefix: str = 'score_samples_') → Union[DataFrame, DataFrame]

Method not supported for this class.

Raises:

TypeError – Supported dataset types: snowpark.DataFrame, pandas.DataFrame.

Parameters:

  • dataset – Union[snowflake.snowpark.DataFrame, pandas.DataFrame] Snowpark or Pandas DataFrame.

  • output_cols_prefix – Prefix for the response columns

Returns:

Output dataset with probability of the sample for each class in the model.

set_drop_input_cols(drop_input_cols: Optional[bool] = False) → None
set_input_cols(input_cols: Optional[Union[str, Iterable[str]]]) → GraphicalLasso

Input columns setter.

Parameters:

input_cols – A single input column or multiple input columns.

Returns:

self

set_label_cols(label_cols: Optional[Union[str, Iterable[str]]]) → Base

Label column setter.

Parameters:

label_cols – A single label column or multiple label columns if multi task learning.

Returns:

self

set_output_cols(output_cols: Optional[Union[str, Iterable[str]]]) → Base

Output columns setter.

Parameters:

output_cols – A single output column or multiple output columns.

Returns:

self

set_params(**params: Any) → None

Set the parameters of this transformer.

The method works on simple transformers as well as on sklearn compatible pipelines with nested objects, once the transformer has been fit. Nested objects have parameters of the form <component>__<parameter> so that it’s possible to update each component of a nested object.

Parameters:

**params – Transformer parameter names mapped to their values.

Raises:

SnowflakeMLException – Invalid parameter keys.

set_passthrough_cols(passthrough_cols: Optional[Union[str, Iterable[str]]]) → Base

Passthrough columns setter.

Parameters:

passthrough_cols – Column(s) that should not be used or modified by the estimator/transformer. Estimator/Transformer just passthrough these columns without any modifications.

Returns:

self

set_sample_weight_col(sample_weight_col: Optional[str]) → Base

Sample weight column setter.

Parameters:

sample_weight_col – A single column that represents sample weight.

Returns:

self

to_sklearn() → Any

Get sklearn.covariance.GraphicalLasso object.

Attributes

model_signatures

Returns model signature of current class.

Raises:

SnowflakeMLException – If estimator is not fitted, then model signature cannot be inferred

Returns:

Dict with each method and its input output signature

Language: English